NanoString GeoMx Spatial Transcriptomics
The recommended and preferred solution for best-in-class GeoMx data analysis
NanoString nCounter Gene and miRNA Expression
Bruker's recommended and preferred solution for best-in-class nCounter data analysis
Bulk RNA-seq Gene Expression
DIY Bioinformatics for this genomics staple
CS Genetics SimpleCell 3' Gene Expression
Single Cell Without the Hassle (or Instrument)
Single Cell Gene Expression
From FASTQ to cell clusters and beyond
Gene Regulation & Anti-Sense: Small RNA-seq
Small RNA-seq data analysis designed for the biologist
Histone Mark & Transcription Factor: ChIP-seq
Comprehensive ChIP-seq data analysis
Chromatin Accessibility: ATAC-Seq
Genome-wide chromatin accessibility analysis
Sharing & Collaboration
Accelerate teamwork anywhere in the world
Knowledge Graph and Search
Data organized for semantic queries
COVID-19 Diagnostic Monitoring System
SARS-CoV-2 Viral Mutation Tracking
COVID Research Community
Global research analyzing COVID-19 genomic datasets
Immuno Oncology
Making discoveries on IO research
Breast Cancer
Identifying differentially expressed miRNAs in breast cancer
HIV
Transcriptional and genomic profiling study of HIV+ DLBCL
Diabetes
Discover and accelerate T1D
Multi-Omics Dataset
Explore multi-omics datasets in epigenetics research
Single Cell Data
Explore datasets with our Cell Ranger graph-based clustering
nanoString Gene Expression
Analyze your nCounter data in minutes
nanoString Mouse Glial Profiling Panel
Explore neuroinflammatory astrocyte subtypes in the mouse brain
RNA-Seq Data
Get started with bulk RNA-Seq data
Subscriptions and Pricing
Learn about Enterprise, Professional, and Academic subscriptions
Enterprise Offering
Expand the depth and reach of your scientific data teams
ROSALIND transforms the analysis of Single Cell RNA-Seq with an end-to-end web-based experience for analysis, interpretation and collaboration. Interactive analyses of single cell clusters reveal biology of cells.
ROSALIND intelligently gathers relevant knowledge to help you best identify & annotate cell types. Notes are securely maintained across cluster methods, so you can capture observations in any context without losing a beat.
Dive deeper into single cell clusters to explore gene expression using violin plots and interactive T-SNE and UMAP projections. Define cluster comparisons to see differentially expressed genes & pathway interpretation.
Analyzing your data is only half the battle. Getting the right plot and image to communicate your findings makes all the difference. ROSALIND simplifies single cell data visualization giving you the plots you need with the controls to adjust fonts, plot sizes, zoom into clusters, hide legends, and see results across all samples.
Accelerate your single cell interpretation by collaborating in real-time with colleagues across the globe. Graph-accelerated knowledge bases identify cell types and assist users in annotating cell clusters. Seamlessly share analyzed data, annotations, and lists of genes of interest.
Enjoy the thrill of seeing your differential expression results come to life as dynamic, interconnected plots and diagrams with gene lists, heatmaps, volcano & MA plots, and advanced covariate correction.
Discover more and save on valuable resources since no additional tools are required when using the integrated pathway interpretation provided by the ROSALIND Knowledge Graph and integrated biomedical knowledge bases. Explore interactive pathway diagrams with detailed term descriptions, annotated fold-change colors, and gene heatmaps.
ROSALIND Meta-Analysis combines multi-omics datasets and uses unsupervised machine learning coupled with our advanced Knowledge Graph to intelligently uncover and interpret gene signatures.
Interested in ROSALIND for Single Cell Analysis?